SNPFisher : Variant Report Compiler

Variation data for FLI, TL, and WIK is compiled against reference Zv9

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UCSC Format Ranges And/Or RefSeq Gene Names Batch Query : (UCSC format chrX:Y-Z ; Only One entry per line)
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(Your query may take a variable amount of time depending on filter settings and size of ranges selected)

Optional Filters


(Frequency in fractional format: e.g. 50% allele would = 0.5)
FLI frequency filter FLI Minimum Depth
TL frequency filter TL Minimum Depth
WIK frequency filter WIK Minimum Depth

Specific Restriction Enzyme Requirements

ENZYMENo RequirementSite CreatedSite DestroyedAny Change
AatII
AvrII
BamHI
BglII
BsgI
EagI
EcoRI
EcoRV
HindIII
KpnI
MseI
NcoI
NdeI
NheI
NotI
PstI
PvuI
SacI
SacII
SalI
SmaI
SpeI
Sphl
XbaI
XhoI
XmaI

Other Restriction Enzyme Change Requirement

(For Example: "+ApoI" requires creation of a new ApoI site, "-ClaI" requires elimination of a ClaI site.)
(Alternatively, "HaeII" alone will select entries where any HaeII change is found.)